Biochemical and structural characterization of enzymes in the 4-hydroxybenzoate catabolic pathway of lignin-degrading white-rot fungi

Eugene Kuatsjah, Alexa Schwartz, Michael Zahn, Konstantinos Tornesakis, Zoe Kellermyer, Morgan Ingraham, Sean P. Woodworth, Kelsey Ramirez, Paul Cox, Andrew Pickford, Davinia Salvachúa*

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

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Abstract

White-rot fungi (WRF) are the most efficient lignin degrading organisms in nature. However, their capacity to use lignin-related aromatic compounds, such as 4-hydroxybenzoate, as carbon sources has been only recently described and proposed to occur via the hydroxyquinol pathway. To date, the hydroxyquinol pathway has not been fully characterized in any single species from lignin-related aromatic compounds and information on the structure-function relationships of these enzymes is unavailable. Here, we characterize seven enzymes from two WRF, Trametes versicolor and Gelatoporia subvermispora, which constitute a four-enzyme biochemical cascade from 4-hydroxybenzoate to β-ketoadipate, via the hydroxyquinol pathway. Furthermore, we solve the crystal structure of four enzymes from this pathway and identify mechanistic differences with the closest bacterial and fungal structural homologs. Overall, this research expands our understanding of aromatic catabolism by WRF and establishes an alternative strategy for the conversion of lignin-related compounds to the valuable molecule β-ketoadipate, contributing to the development of biological processes for lignin valorization.
Original languageEnglish
Article number115002
Number of pages20
JournalCell Reports
Volume43
Early online date26 Nov 2024
DOIs
Publication statusPublished - 24 Dec 2024

Keywords

  • Aromatic catabolism
  • oxygenase
  • Trametes versicolor
  • Gelatoporia subvermispora
  • UKRI
  • BBSRC
  • BB/T008768/1

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