CoNtRol: an open source framework for the analysis of chemical reaction networks

Pete Donnell, Murad Banaji, Anca Marginean, Casian Pantea

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Abstract

We introduce CoNtRol, a web-based framework for analysis of chemical reaction networks (CRNs). It is designed to be both extensible and simple to use, complementing existing CRN-related tools. CoNtRol currently implements a number of necessary and/or sufficient structural tests for multiple equilibria, stable periodic orbits, convergence to equilibria and persistence, with the potential for incorporation of further tests.

AVAILABILITY AND IMPLEMENTATION: Reference implementation: reaction-networks.net/control/. Source code and binaries, released under the GPLv3: reaction-networks.net/control/download/. Documentation: reaction-networks.net/wiki/CoNtRol.

Original languageEnglish
Pages (from-to)1633-1634
JournalBioinformatics
Volume30
Issue number11
Early online date30 Jan 2014
DOIs
Publication statusPublished - 1 Jun 2014

Keywords

  • chemical reaction networks

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