Projects per year
Abstract
We show the distribution of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) genetic clades over time and between countries and outline potential genomic surveillance objectives. We applied three genomic nomenclature systems to all sequence data from the World Health Organization European Region available until 10 July 2020. We highlight the importance of real-time sequencing and data dissemination in a pandemic situation, compare the nomenclatures and lay a foundation for future European genomic surveillance of SARS-CoV-2.
Original language | English |
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Number of pages | 8 |
Journal | Eurosurveillance |
Volume | 25 |
Issue number | 32 |
DOIs | |
Publication status | Published - 13 Aug 2020 |
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Dive into the research topics of 'Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020'. Together they form a unique fingerprint.Datasets
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Dataset: GISAID EpiCov SARS-CoV-2 Whole Genome Sequencing Database
Robson, S. (Creator), GISAID, 18 Nov 2020
https://www.epicov.org/epi3/frontend#3bd481
Dataset
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COVID-19 Genomics UK (COG-UK) consortium
Robson, S. (Creator), NCBI, 29 Apr 2020
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB37886
Dataset
Projects
- 1 Finished
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STOP COVID-19: Sequencing and Tracking Of Phylogeny in COVID-19
Robson, S., Scarlett, G., Bourgeois, Y., Beckett, A., Loveson, K., Glaysher, S., Chauhan, A., Goudarzi, S., Cook, K., Fearn, C., Paul, H. & Dent, H.
UK Health Security Agency, COG-UK
1/04/20 → 31/03/23
Project: Research