Towards a grid-enabled biomolecular simulation database

Bing Wu, Kaihsu Tai, Muan Hong Ng, Steven Johnston, Stuart Murdock, Hans Fangohr, Mark S. P. Sansom, Jonathan Essex, Paul Jeffreys, Simon Cox

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

The overall aim of the BioSimGrid project is to build a distributed data and computing platform to enable large scale analysis of the results of biomolecular simulations. To address the challenges of distributed computing on large amounts of simulation data, we have built an open software framework system based on off-the-shelf middleware, SRB (Storage Resource Broker) and the distributed enterprise database, Oracle 10g. We describe the implementation details: architecure, data distribution, security, and implemented analysis modules. We outline two examples, among many more, where BioSimGrid is a necessary tool.
Original languageEnglish
Title of host publicationProceedings of the UK e-Science All Hands Meeting 2005
Place of PublicationSwindon, UK
PublisherEngineering and Physical Sciences Research Council
ISBN (Print)1904425534
Publication statusPublished - Sep 2005
EventUK e-Science All Hands Meeting 2005 - Nottingham, United Kingdom
Duration: 18 Sep 200521 Sep 2005

Conference

ConferenceUK e-Science All Hands Meeting 2005
Country/TerritoryUnited Kingdom
CityNottingham
Period18/09/0521/09/05

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